CDS

Accession Number TCMCG057C28166
gbkey CDS
Protein Id XP_018492361.1
Location join(37443698..37443725,37443812..37444386,37444477..37444716,37444848..37445000,37445114..37446879,37446976..37446979)
Gene LOC108862654
GeneID 108862654
Organism Raphanus sativus

Protein

Length 921aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636859.1
Definition PREDICTED: protein CHROMATIN REMODELING 35 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description SNF2 domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10875        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000419        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000775        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000792        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005720        [VIEW IN EMBL-EBI]
GO:0005721        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031062        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031618        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032776        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035561        [VIEW IN EMBL-EBI]
GO:0035563        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043330        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043954        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051098        [VIEW IN EMBL-EBI]
GO:0051099        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051570        [VIEW IN EMBL-EBI]
GO:0051574        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060148        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060964        [VIEW IN EMBL-EBI]
GO:0060966        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070827        [VIEW IN EMBL-EBI]
GO:0070828        [VIEW IN EMBL-EBI]
GO:0070829        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071360        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080188        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090577        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:1900109        [VIEW IN EMBL-EBI]
GO:1900111        [VIEW IN EMBL-EBI]
GO:1900368        [VIEW IN EMBL-EBI]
GO:1900370        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGATTCTCCAACCTCCCGTTAACGGTCACCGCAAAAGGAAGGCTGATGACGGACGACTCTGTCTCGGTGGCTCCGAAGCAACAAAGCGGGTCAGAAACTCATCTAAAGTCACAGACTTTTCTCAACCCTTTGCTGTCAGCAACATGCTCGAGGCTCTAGACGGTGGTAAGTTCGGGAGCGTTACCAAAGAGCTGGAAGAGGTGGCTAACCTGAGGATGGAGCTGGTCAAGCGTTGCATCTGGTTATATCCGTCGCTGGCCCATTCTGTGTTTGGAGCAGCAGCAGAGGATGGTGGCCAAGGAGAGCTTGTGAGTTTGGAGAATCAGCTGGCTTTGGATTGTGTTATTGACTTGGATGGTGATGATACTGATGCTTCTAAGAAGGCTCTCTGTGTGGTTCCTTCCACTGAGATTGTTATTCTTGATTCTGATGATGATGATGATGAGGGTGTTGAGAAGCCTAAGTATCCGTTTCAGTCGAGTCTTGTGCAGCATCAGAAGAGTCAAGGCGATGTGGTGCCTGTGACGCCGCAGTTCGCTTTTGAGGAGGTTGTTTTGGGGAAGGGAAAGGACATGTCTTGTGCCATTACGGCCTTGGTGGAGGGACAAAGTAGTAGAGGCAACCTACTTGCTATAGAAAATGGTATGGCTATTGACAGAGATGTCTGCGTGGGACAAGCGAGGAGAGAAAAGGTCATTGCCATTGAAAATGGTGTTGTCAACGATAAGGGTGTCTATGTGGGCGTTGAAGATGATGAAAGTGGTGATGAGTCTGAAGCAGCAGATGAGGATCTTGGTAATATCTGGAACGAAATGGCAATGTCGATAGTGTGTTCCAAGGATGCAGAGACTTCACGTAATGAATCAAAGACCGATGAAGTGGAAGACTGTGAGCACTCCTTTATACTAAAGGACGACATGGGTTATGTTTGCCGTGTTTGCGGAGTTATTGACAAAAGCATCTTAGACATTATTGATGTGAACTTCAGTAAAGCGAAAAGAAGCACGAGAACATATGCTTCTGAAAGTCGGGTTAAAAAGTTTGGGGAATCAGATTTTGAGATTAAGTTATCTGAAGAAGGGCTGATGATAGGTGGACTTTCTGCTCATCCGACGCATGCTAACAAGATGAAGCCTCATCAAATTGAAGGGTTCCAATTCCTTTGCAGCAACTTAGTAGCAGATGAGCCTGGTGGCTGTATCATGGCTCATGCTCCAGGTTCTGGAAAAACCTTCATGATCATCAGTTTCATGCAGAGCTTCCTGGCAAAGTATCCTCAGGCCAAGCCATTGGTTGTGCTTCCAAAGGGGATTTTGTCTACCTGGAAAAGAGAGTTTGTGAGATGGCAGGTCGAAGACATTCCACTGCTTGACTTCTACAGCGCTAAAGCAGAAAACCGTGCACAACAGCTGGCCATTTTGAAACAGTGGATGGAGAAGAAGAGTATCTTGTTTCTGGGCTACAAGCAGTTCTCAACTATTGTCTGTGATGATACAAGCACCGACTCACATTCTTGCCAGGAGATATTGCTGAAAGTACCTTCGATCCTCATCTTGGATGAAGGACACACTCCAAGAAACGAGGACACAAATGTATTGCAGTCCCTTGCCCAAGTCCAAACACCAAGGAAAGTTGTCCTCTCAGGAACGCTTTATCAGAACCACGTGAAGGAGGTTTTCAACATTCTGAACCTCGTTCGACCAAAGTTCCTCAAGTTGGATACCTCCAAGTCTATTGTTAAAAGGATCCTGAGTCGTGCCCCTATCTCCGCTGTCAGGTCTCATCTGGGAGGCAATTCAGACGTGTCTTCGGCTTTCAACGAAATTGTGGAGCACACGCTGCAGAAGTGCGAGGATTTCAAGATGAAAATTAACATGATCCAGGATTTGAGGGAGATGACAAAGAAGGTGCTTCACTACTACAAAGGAGACTTCTTAGATGAGCTTCCTGGGCTTGATGATTTCACTGTGGTTCTCAATCTGTCTCCAAGGCAGTTGACTGAAGTGAAGAAGTTGAGGCGTGAGAAGAGAAAATTCAAGGTTTCGGCTGTGGGGAGTGCAATTTACCTTCATCCGAGGCTGAACGCTTTCTCTGAAAAGACTGATAGTAAGACTGATAGTGTATCTGATTCAACTATGGACGAAATGCTAGAGAAGCTAGATGTGGATGAAGGCGTGAAAGCAAAGTTCTTCCTAAACTTGATAGACCTGTGTGACTCAGCAGGGGAGAAGCTCTTGGTTTTCAGCCAGTATCTCGTGCCTCTGAAGTTTCTTGAAAGACTAGCTGGTCTAGCTAAAGGATGGAAGCTAGGGAAAGAAGTCTTTGTTCTCACAGGAGAATCCAGCTCTGAGCAGCGTGAGTTGTCTATGGAAAGGTTCAACAATTCGCCAGACGCCAAAGTGTTCTTCGGTTCGATAAGGGCCTGTGGAGAAGGTATCTCTCTAGTTGGAGCATCTCGGATACTGATTCTGGATGTTCCTCTAAACCCTTCAGTGACACGCCAAGCGATAGGGAGAGCTTTTAGACCAGGACAGACGAAGAAAGTGCATGCGTACAGATTGATAGCTGGGTCATCACCTGAGGAAGAGGATCACAACACTTGCTTCAAAAAGGAAGTCATCTCAAAGATGTGGTTCGAGTGGAATGAGTACTGTGGATACCGTAACTTTGAGGTAGAGACAATCGATGTGGATGATGCTGGTGATATGTTCCTTGAAAGTCCTGCCTTACGAGAAGATATAAGAGTTCTCTACAAAAGGTAA
Protein:  
MQILQPPVNGHRKRKADDGRLCLGGSEATKRVRNSSKVTDFSQPFAVSNMLEALDGGKFGSVTKELEEVANLRMELVKRCIWLYPSLAHSVFGAAAEDGGQGELVSLENQLALDCVIDLDGDDTDASKKALCVVPSTEIVILDSDDDDDEGVEKPKYPFQSSLVQHQKSQGDVVPVTPQFAFEEVVLGKGKDMSCAITALVEGQSSRGNLLAIENGMAIDRDVCVGQARREKVIAIENGVVNDKGVYVGVEDDESGDESEAADEDLGNIWNEMAMSIVCSKDAETSRNESKTDEVEDCEHSFILKDDMGYVCRVCGVIDKSILDIIDVNFSKAKRSTRTYASESRVKKFGESDFEIKLSEEGLMIGGLSAHPTHANKMKPHQIEGFQFLCSNLVADEPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILSTWKREFVRWQVEDIPLLDFYSAKAENRAQQLAILKQWMEKKSILFLGYKQFSTIVCDDTSTDSHSCQEILLKVPSILILDEGHTPRNEDTNVLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSIVKRILSRAPISAVRSHLGGNSDVSSAFNEIVEHTLQKCEDFKMKINMIQDLREMTKKVLHYYKGDFLDELPGLDDFTVVLNLSPRQLTEVKKLRREKRKFKVSAVGSAIYLHPRLNAFSEKTDSKTDSVSDSTMDEMLEKLDVDEGVKAKFFLNLIDLCDSAGEKLLVFSQYLVPLKFLERLAGLAKGWKLGKEVFVLTGESSSEQRELSMERFNNSPDAKVFFGSIRACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQTKKVHAYRLIAGSSPEEEDHNTCFKKEVISKMWFEWNEYCGYRNFEVETIDVDDAGDMFLESPALREDIRVLYKR